CAVER is a software tool for analysis and visualization of tunnels and channels in protein structures. Tunnels are void pathways leading from a cavity buried in a protein core to the surrounding solvent. Unlike tunnels, channels lead through the protein structure and their both endings are opened to the surrounding solvent. Studying of these pathways is highly important for drug design and molecular enzymology.

CAVER Analyst

CAVER provides rapid, accurate and fully automated calculation of tunnels and channels in static and dynamic structures. The molecules amendable to analysis of CAVER include proteins, nucleic acids, or inorganic materials.

The software is available as CAVER 3.0 command-line version, CAVER 3.0 PyMol plugin or graphical application CAVER Analyst 1.0. The latest version of CAVER enables the analysis of molecular dynamics simulations. CAVER Analyst allows easy set-up of calculation, visualization of results, and efficient visual analysis of data.



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524 citations
5834 registered users
73290x CAVER downloaded

news

July 11, 2017

CAVER was cited in the NATURE journal in article Electron cryo-microscopy structure of the...

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January 18, 2017

CAVER was cited in the NATURE journal in article Structure of a CLC chloride ion channel by...

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January 18, 2017

CAVER was cited in the NATURE journal in article Crystal structure of the epithelial calcium channel...

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